Phenotype MicroArrays™ for Microbial Cells 사용 문헌 리스트 (241-320) 

320.   Multiple antibiotic susceptibility of polyphosphate kinase mutants (ppk1 and ppk2) from Pseudomonas 

       aeruginosa PAO1 as revealed by global phenotypic analysis, J Ortiz-Severin, M Varas, C Bravo-Toncio, 

       N Guiliani, F Chavez, Biological Research, 2015,

319.   Chromosomal position shift of a regulatory gene alters the bacterial phenotype, V Gerganova, M Berger, 

       E Zaldastanishvili, P Sobetzko, C Lafon, M Mourez, A Travers, G Muskhelishvili, Nucleic Acids Research, 2015,

318.   Phenotype MicroArrays as a complementary tool to next generation sequencing for characterization of 

       tree endophytes,K Blumenstein, D Macaya-Sanz, J Martin, B Albrectsen, JWitzell1, METHODS, 2015 

317.   Comparative genomic and phenomic analysis of Clostridium difficile and Clostridium sordellii, two related 

       pathogens with differing host tissue preference. Joy Scaria, Haruo Suzuki, et al., BMC Genomics, 2015, 

316.   Expression of RCK2 MAPKAP (MAPK-activated protein kinase) rescues yeast cells sensitivity to osmotic stress. 

       V Kumar, A J Hart, T T Wimalasena1, G A Tucker1 and D Greetham, Microbial Cell Factories, 2015 

315.   Complete genome sequence and phenotype microarray analysis of Cronobacter sakazakii SP291: 

       a persistent isolate cultured from a powdered infant formula production facility. Qiongqiong Yan, Karen Power, et al, 

       Frontiers in Microbiology, 2013,

314.   Evaluation of butyrate-induced production of a mannose-6-phosphorylated therapeutic enzyme using parallel 

       bioreactors.Madhavarao CN; Agarabi CD, et al, Biotechnol Appl Biochem, 2014,

313.   Phenotype Microarray Analysis of Mycobacterium smegmatis and Its Isogenic Strains Reveals Novel Functions of 

       (p)ppGpp and c-di-GMP in Mycobacterial Physiology. Kuldeepkumar Ramnaresh Gupta, Sanjay Kasetty and 

       Dipankar Chatterji, APM, January 2015,

312.   Comparative nutritional and chemical phenome of Clostridium difficile isolates determined using 

       phenotype microarrays. Scaria J, Chen JW, et al, Int J Infect Dis, August 2014,

311.   Role of transcription factor NimR (YeaM) in sensitivity control of Escherichia coli to 2-nitroimidazole. 

       Hiroshi Ogasawara, Seina Ohe, Akira Ishihama, FEMS, December 2014,

310.   Transcriptomic and biochemical analyses identify a family of chlorhexidine efflux proteins. 

       Kark A. Hassnan, Scott M. Jackson, et al, PNAS, September 2013,

309.   Coexistence and Within-Host Evolution of Diversified Lineages of Hypermutable Pseudomonas aeruginosa in 

       Long-term Cystic Fibrosis Infections. MSfoia Feliziani, Rasmus L. Marvig, et al, Plos One, October 2014,

308.   Phenotype microarray technology and its application in industrial biotechnology, Greetham D, Biotechnol Lett, 

       June 2014,

307.   Development of a phenotypic assay for characterisation of ethanologenic yeast strain sensitivity to inhibitors 

       released from lignocellulosic feedstocks. Greetham D, Wimalasena T, et al, J Ind Microbiol Biotechnol, June 2014,

306.   Phenotypic characterisation of Saccharomyces spp. for tolerance to 1-butanol. Zaki AM, Wimalasena TT, 

       Greetham D, Epub, September 2014,

305.   High-Throughput Screening of Dipeptide Utilization Mediated by the ABC Transporter DppBCDF and Its 

       Substrate-Binding Proteins DppA1-A5 in Pseudomonas aeruginosa. Daniel Pletzer, Corinne Lafon, et al, 

       Plos One, October 2014, 

304.   L-Histidine Inhibits Biofilm Formation and FLO11-Associated Phenotypes in Saccharomyces cerevisiae Flor Yeasts. 

       Marc Bou Zeidan, Giacomo Zara, et al, Plos One, November 2014,

303.   Environmental Heterogeneity Drives Within-Host Diversification and Evolution of Pseudomonas aeruginosa. 

       Trine Markussen, Rasmus Lykke Marvig, et al, Mol Bio No. 5, September 2014,

302.   Long-term phenotypic evolution of bacteria. German Plata, Christopher S. Henry & Dennis Vitkup, 

       Nature, September 2014, 

301.   Differences in carbon source utilisation distinguish Campylobacter jejuni from Campylobacter coli. 

       Sariqa Wagley1, Jane Newcombe et al, BMC Microbiology 2014, 

300.   The Transcription Factor Ste12 Mediates the Regulatory Role of the Tmk1 MAP Kinase in Mycoparasitism and 

       Vegetative Hyphal Fusion in the Filamentous Fungus Trichoderma atroviride.Sabine Gruber, Susanne Zeilinger, 

       Plos One, Oct 2014,

299.   GenoBase: comprehensive resource database of Escherichia coli K-12. Otsuka Y, Muto A, et al. 

       Nucleic Acids Res, Nov 2014,

298.   Evidence of Metabolis Switching and Implications for Food Safety from the Phenome(s) of Salmonella enterica 

       Serovar Typhimurium DT104 Cultured at Selected Points across the Pork Production Food Chain. Marta Martins, 

       Matthew P. McCusker, et al. Applied and Environmental Microbiology, June 2013,

297.   Utilization of host-derived cysteine-containing peptides overcomes the restricted sulphur metabolism of 

       Campylobacter jejuni. Hanne Vorwerk, Juliane Mohr, et al., Molecular Microbiology, August 2014,

296.   Phenotypic Microarrays Suggest Escherichia coli ST131 Is Not a Metabolically Distinct Lineage of Extra-Intestinal 

       Pathogenic E. coli. A Alqasim, R Emes, G Clark, J Newcombe, R La Ragione, A McNally, Plos One, Feb 2014,

295.   Genotype and phenotypes of an insteine-adapted Escherichia coli K-12 mutant selected by animal passage for 

       superior colonization. Fabich AJ, Leatham MP, Grissom JE, Wiley G, Lai H, Najar F, Roe BA, Cohen PS, Conway T, 

       Infection and Immunity, June 2011,

294.   Parallel independent evolution of pathogenicity within the genus Yersinia. Sandra Reuter et al., Proceedings of the 

       National Academy of Sciences, May 2014,

293.   Rosenbergiella australoborealis sp. nov, Rosenbergiella collisarenosi sp. nov. and Rosenbergiella epipactidis sp. nov.,

       three novel bacterial species isolated from oral nectar. Marijke Lenaerts et al., Systematic and Applied Microbiology, 

       March 2014,

292.   Characterization of tetA-like gene encoding for a MFS efflux pump in Streptococcus thermophilus. S Arioli, 

       S Guglielmetti, S Amalfitano, C Viti, E Marchi, F Decorosi, L Giovannetti and D Mora, FEMS Microbiology Letters, April 2014,

291.   iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactis. Oscar Dias1, Rui Pereira1, 

       Andreas K. Gombert2, Eugenio C Ferreira and Isabel Rocha1, Biotechnology Journal, April 2014,

290.   Integrative Conjugative Element ICE-Box Confers Oxidative Stress Resistance to Legionella pneumophila In Vitro and 

       in Macrophages. Kaitlin J. Flynn, Michele S. Swanson, mBio, April 2014,

289.  Genomic and Phenotypic Characterization of Vibrio cholerae Non-O1 Isolates from a US Gulf Coast Cholera Outbreak. 

       Bradd J. Haley et al., PLOS One, April 2014,

288.   Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210T (= DSM 26640T = BS107T). 

       Oliver Frank1, Silke Pradella1, Manfred Rohde2, Carmen Scheuner1, Hans-Peter Klenk1, Markus Goker1, Jorn Petersen1, 

       Standards in Genomic Sciences, March 2014,

287.   Role of Intracellular Carbon Metabolism Pathways in Shigella flexneri Virulence. E. A. Waligora, C. R. Fisher, 

       N. J. Hanovice, A. Rodou, E. E. Wyckoff and S. M. Payne, American Society for Microbiology, April 2014,

286.   Phenotype microarray technology and its application in industrial biotechnology. Darren Greetham, 

       European Union 2014, January 2014,

285.   From genome mining to phenotypic microarrays: Planctomycetes as source for novel bioactive molecules. 

       Olga Jeske, Mareike Jogler, Jorn Petersen, Johannes Sikorski, Christian Jogler, Springer Science+ 

       Business Media Dordrecht 2013, August 2013,

284.   Metabolic Model Refinement Using Phenotypic Microarray Data. Pratish Gawand, Laurence Yang, William R. Cluett, 

       Radhakrishnan Mahadevan, Methods in Molecular Biology, May 2013,

283.   Opm: An R package for analysing OmniLog Phenotype MicroArray data. Lea A. I. Vaas, Johannes Sikorski, Benjamin 

       Hofner, Anne fiebig, Nora Buddruhs, Hans-Peter Klenk, Markus Goker, Bioinformatics Advance Access, June 2013,

282.   Impacts of pr-10a Overexpression at the Molecular and the Phenotypic Level. Lea A. I. Vaas, Maja Marheine, 

       Johannes Sikorski, Markus Goker, Heinz-Martin Schumacher, International Journal of Molecular Sciences, July 2013,

281.   Central metabolism controls transcription of a virulence gene regulator in Vibrio cholerae. Yusuke Minato, 

       Sara R. Fassio, Alan J. Wolfe, Claudia C. Hase, Microbiology, February 2013,

280.   Phenotypic characterization of sarR mutant in Staphylococcus aureus. Andrea L. Lucas, Adhar C. Manna, 

       Microbial Pathogenesis, November 2012,

279.   Campylobacter jejuni carbon starvation protein A (CstA) is involved in peptide utilization, motility and 

       agglutination, and has a role in stimulation of dendritic cells. J. J. Rasmussen, C. S. Vegge, H. Frokiaer, R. M. Howlett, 

       K. A. Krogfelt, D. J. Kelly and H. Ingmer, Journal of Medical Microbiology, May 2013,

278.   Complete genome sequence and phenotype microarray analysis of Cronobacter sakazakii SP291: a persistent 

       isolate cultured from a powdered infant formula production facility. Qiongqiong Yan, Karen A. Power, Shane Cooney, 

       Edward Fox, Gopal R. Gopinath, Christopher J. Grim, Ben D. Tall, Matthew P. McCusker, Seamus Fanning, 

       Frontiers in Microbiology, September 2013,

277.   Isolation and Characterization of Burkholderia rinojensis sp. nov., a Non-Burkholderia cepacia Complex Soil 

       Bacterium with Insecticidal and Miticidal Activities. Ana Lucia Cordova-Kreylos, Lorena E. Fernandez, Marja Koivunen, 

       April Yang, Lina Flor-Weiler, Pamela G. Marrone, Applied and Environmental Microbiology, October 2013,

276.   Salmonella Utilizes d-Glucosaminate via a Mannose Family Phosphotransferase System Permease and Associated 

       Enzymes. Katherine A. Miller, Robert S. Phillips, Jan Mrazek, Timothy R. Hoover, Journal of Bacteriology, July 2013,

275.   Virulence and Metabolic Characteristics of Salmonella enterica Serovar Enteritidis Strains with Different SefD 

       Variantsin Hens. Cesar A. Morales, Jean Guard, Roxana Sachez-Ingunza, Devendra H. Shah, Mark Harrison, Applied and 

       Environmental Microbiology, June 2012,

274.   Dimethyl adenosine transferase (KsgA) deficiency in Salmonella entericaSerovar Enteritidis confers susceptibility to 

       high osmolarity and virulence attenuation in chickens. Kim Lam Chiok, Tarek Addwebi, Jean Guard, Devendra H. Shah, 

       Applied and Environmental Microbiology, October 2013,

273.   Exidence of Metabolic Switching and Implications for Food Safety from the Phenome(s) of Salmonella enterica 

       Serovar Typhimurium DT104 Cultured at Selected Points across the Pork Production Food Chain. Marta Martins, 

       Matthew P. McCusker, Evonne M. McCabe, Denis O’Leary, Geraldine Duffy, Seamus Fanning, 

       Applied and Environmental Microbiology, June 2013,

272.   Link between intraphagosomal biotin and rapid phagosomal escape in Francisella. Brooke A. Napier, Lena Meyer, 

       James E. Bina, Mark A. Miller, Anders Sjostedt, David S. Weiss, PNAS, September 2012,

271.   Genomic diversity and fitness of E. Coli strains recovered from the intestinal and urinary tracts of women with 

       recurrent urinary tract infection. Swaine L. Chen, Meng Wu, Jeffrey P. Henderson, Thomas M. Hooton, 

       Micheal E. Hibbing, Scott J. Hultgren, Jeffrey I. Gordon, Sci Transl Med, May 2013,

270.   The Transcriptional Response of Cryptococcus neoformans to Ingestion by Acanthamoeba castellanii and 

       Macrophages Provides Insights into the Evolutionary Adaptation to the Mammalian Host. Lorena da S. Derengowski, 

       Hugo Costa Paes, Patricia Albuquerque, Aldo Henrique F. P. Tavares, Larissa Fernandes, Ildinete Silva Pereira, 

       Arturo Casadevall, Eukaryotic Cell 2013, March 2013,

269.   Systems-Based Approaches to Probing Metabolic Variation within the Mycobacterium tuberculosis Complex. 

       Emma K Lofthouse, Paul R Wheeler, Dany J V Beste, Bhagwati L Khatri, Huihai Wu, Ton A Mendum, Andrzej M Kierzek, 

       Johnjoe McFadden, PLOS ONE, Volume 8, Issue 9, September 2013,

268.   Β-phenylethylamine as a novel nutrient treatment to reduce bacterial contamination due to Escherichia coli O157:H7 

       on beef meat. Ty Lynnes, S.M. Horne, B.M. PrüΒ, Meat Science, Volume 96, Issue 1, January 2013, Pages 165-171

267.   The Carbohydrate Metabolism Signature of Lactococcus lactis Strain A12 Reveals Its Sourdough Ecosystem Origin, 

       Delphine Passerini, Michele Coddeville, Pascal Le Bourgeois, Pascal Loubiere, Paul Ritzenthaler, Catherine Fontagne-Faucher, 

       Marie-Line Daveran-Mingot, Muriel Cocaign-Bousquet, Applied and Environmental Microbiology, Volume 79, Number 19, 

       October 2013

266.   Establishment of a Method To Rapidly Assay Bacterial Persister Metabolism, Mehmet A Orman, Mark P Brynildsen, 

       Antimicrobial Agents and Chemotherapy, Volume 57, Number 9, September 2013, Pages 4398-4409

265.   Nutritional physiology of a rock-inhabiting, model microcolonial fungus from an ancestral lineage of the 

       Chaetothyriales (Ascomycetes), Corrado Nai, Helen Y. Wong, Annette Pannenbecker, William J. Broughton, e, 

       Isabelle Benoit, Ronald P. de Vries, Cécile Gueidan, Anna A. Gorbushina, Fungal Genetics and Biology, Volume 56, 

       July 2013, Pages 54-66

264.   Genomic Comparison of Escherichia coli O104:H4 Isolates from 2009 and 2011 Reveals Plasmid, and Prophage 

       Heterogeneity, Including Shiga Toxin Encoding Phage stx2, Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, 

       et al. (2012) Genomic Comparison of Escherichia coli O104:H4 Isolates from 2009 and 2011 Reveals Plasmid, and 

       Prophage Heterogeneity, Including Shiga Toxin Encoding Phage stx2. PLoS ONE

263.   Biomimetic Synthesis of Selenium Nanospheres by Bacterial Strain JS-11 and Its Role as a Biosensor for 

       Nanotoxicity Assessment: A Novel Se-Bioassay, Sourabh Dwivedi, Abdulaziz A. AlKhedhairy, Maqusood Ahamed, 

       Javed Musarrat, 2013, Plos ONE

262.   The unexpected discovery of a novel low-oxygen-activated locus for the anoxic persistence of Burkholderia 

       cenocepacia, Andrea M Sass, Crystal Schmerk, Kirsty Agnoli, Phillip J Norville, Leo Eberl, Miguel A Valvano and 

       Eshwar Mahenthiralingam, The ISME Journal, 2013

261.   The Complete Genome and Phenome of a Community-Acquired Acinetobacter baumannii, Daniel N. Farrugia, 

       Liam D. H. Elbourne, Karl A. Hassan, Bart A. Eijkelkamp, Sasha G. Tetu, Melissa H. Brown, Bhumika S. Shah, 

       Anton Y. Peleg, Bridget C. Mabbutt, Ian T. Paulsen, March 2013, PLoS ONE

260.   Characterization of MSMEG_2631 gene (mmp) encoding a Multidrug and Toxic Compound Extrusion (MATE) family 

       protein in Mycobacterium smegmatis, and exploration of its polyspecific nature using Biolog Phenotype MicroArray, 

       Mukti Nath Mishra, Lacy Daniels, Department of Pharmaceutical Sciences, Texas A&M Health Science Center Irma Lerma 

       Rangel College of Pharmacy, 1010 West Ave. B, Kingsville, Texas 78363, USA, Journal of Bacteriology 2013 Jan 4; 0

259.   Pseudomonas aeruginosa PA1006, Which Plays a Role in Molybdenum Homeostasis, Is Required for Nitrate 

       Utilization, Biofilm Formation, and Virulence, Filiatrault MJ, Tombline G, Wagner VE, Van Alst N, Rumbaugh K, et al. 

       (2013) PLoS ONE

258.   Elucidating the Regulon of the Multi Drug Resistance Regulator RarA in K.pneumoniae, Shyamasree De Majumdar1, 

       Mark Veleba1, Sarah Finn, Seamus Fanning and Thamarai Schneiders, Antimicrob. Agents Chemother. 14 January 2013

257.   Variable Carbon Catabolism among Salmonella enterica Serovar Typhi Isolates, Lay Ching Chai, Boon Hong Kong, 

       Omar Ismail Elemfareji, Kwai Lin Thong, PlosOne May 2012, Volume 7, Issue 5

256.   The Escherichia coli SLC26 homologue YchM (DauA) is a C4-dicarboxylic acid transporter, Eleni Karinou, Emma L. R. 

       Compton, Melanie Morel, Arnaud Javelle, Molecular Microbiology Volume 87, Issue 3, pages 623 to 640, February 2013

255.   Functional analysis of pneumococcal drug efflux pumps associates the MATE DinF transporter to quinolone 

       susceptibility, Nadia Tocci, Francesco Iannelli, Alessandro Bidossi, Maria Laura Ciusa1, Francesca Decorosi, Carlo Viti, 

       Gianni Pozzi1, Susanna Ricci and Marco Rinaldo Oggioni

254.   The Escherichia coli SLC26 homologue YchM (DauA) is a C4-dicarboxylic acid transporter, E Karinou; ELR Compton; 

       M Morel; A Javelle; 2012, Molecular Microbiology

253.   Role of two-component sensory systems of Salmonella enterica serovar Dublin in the pathogenesis of systemic 

       salmonellosis in cattle, Pullinger GD; van Diemen PM; Dziva F; Stevens MP; 2012 Oct 5, p.3108-3122, Microbiology

252.   Selection of bacteria capable of dissimilatory reduction of Fe(III) from a long-term continuous culture on molasses 

       and their use in a microbial fuel cell, Sikora A; Wojtowicz-Sienko J; Piela P; Zielenkiewicz U; Tomczyk-Zak K; 

       Chojnacka A; Sikora R; Kowalczyk P; Grzesiuk E; Blaszczyk M; 2012 Oct, p.305-316, J Microbiol Biotechnol

251.   Biolog phenotype microarrays, Shea A; Wolcott M; Daefler S; Rozak DA; 2012 May, p.331-373, Methods Mol Biol

250.   Visualization and curve-parameter estimation strategies for efficient exploration of phenotype microarray kinetics, 

       Vaas LA; Sikorski J; Michael V; Goker M; Klenk HP; 2012 Mar 6, PLoS One

249.   Effects of the ERES pathogenicity region regulator Ralp3 on Streptococcus pyogenes serotype M49 virulence factor 

       expression, Siemens N; Fiedler T; Normann J; Klein J; Munch R; Patenge N; Kreikemeyer B; 2012 Mar, p.3618-3626, 

       Journal of Bacteriology

248.   Variable carbon catabolism among Salmonella enterica serovar Typhi isolates, Chai LC; Kong BH; Elemfareji OI; 

       Thong KL; 2012 Jun 19, PLoS One

247.   Efficacy of biocides used in the modern food industry to control salmonella enterica, and links between biocide 

       tolerance and resistance to clinically relevant antimicrobial compounds, Condell O; Iversen C; Cooney S; Power KA; 

       Walsh C; Burgess C; Fanning S; 2012 Jun, p.3087-3097, Appl Environ Microbiol

246.   Global transcriptome response to ionic liquid by a tropical rain forest soil bacterium, Enterobacter lignolyticus, 

       Khudyakov JI; D’haeseleer P; Borglin SE; DeAngelis KM; Woo H;Lindquist EA; Hazen TC; Simmons BA; Thelen MP; 2012 Jul, 

       p.E2173-E2182, Proc Natl Acad Sci U S A

245.   Coordinated phenotype switching with large-scale chromosome flip-flop inversion observed in bacteria, Cui L; 

       Neoh HM; Iwamoto A; Hiramatsu K; 2012 Jan, p.E1647-E1656, Proc Natl Acad Sci U S A

244.   Phenotypic and transcriptomic response of auxotrophic Mycobacterium avium subsp. paratuberculosis leuD mutant

       under environmental stress, Chen JW; Scaria J; Chang YF; 2012 Feb, p.e37884, PLoS One

243.   Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments, 

       Chaudhry V; Rehman A; Mishra A; Chauhan PS; Nautiyal CS; 2012 Feb, p.450-460, Microbial Ecology

242.   Genetic analysis of 15 protein folding factors and proteases of the Escherichia coli cell envelope, Weski J; 

       Ehrmann M; 2012 Aug 7, p.3225-3233, Journal of Bacteriology

241.   A novel approach combining the Calgary Biofilm Device and Phenotype MicroArray for the characterization of the 

       chemical sensitivity of bacterial biofilms, Santopolo L; Marchi E; Frediani L; Decorosi F; Viti C; Giovannetti L; 2012 Aug, 

       p.1023-1032, Biofouling

240.   Tools to kill: Genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina, Islam MS; 

       Haque MS; Islam MM; Emdad EM; Halim A; Hossen QM; Hossain MZ; Ahmed B; Rahim S; Rahman MS; Alam MM; Hou S; 

       Wan X; Saito JA; Alam M; 2012 Apr, p.493-, BMC Genomics 

  ☞   Biolog PM 제품 보기