Phenotype MicroArrays™ for Microbial Cells 사용 문헌 리스트 (81-160) 

160.   Longitudinal Study of Pseudomonas aeruginosa Isolates from Cystic Fibrosis Lungs, L. Yang, S.K. Hansen, L. Jelsbak, 

       H. Jarmer , J.A.J. Haagensen, H.K. Johansen, N. Hoiby, S. Molin, Abstract, Florence Conference on Phenotype MicroArray 

       Analysis of Microorganisms, March, 2008.

159.   Functional Diversity and Productivity Peak at Intermediate Dispersal Rate in Evolving Bacterial Metacommunities, 

       P. Venail, R.C. Maclean, T. Bouvier, M.A. Brockhurst, M.E. Hochberg, N. Mouquet, Abstract, Florence Conference on 

       Phenotype MicroArray Analysis of Microorganisms, March, 2008.

158.   Adapting Biolog Phenotype MicroArray Technology to Reveal the Metabolomics of Mycobacterium tubercolosis 

       and Mycobacterium bovis, Slow-growing Pathogenswith d=0.03 to 0.05/h., B. Upadhyay, M.D. Fielder, P.R. Wheeler,

       Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

157.   Phenotypic Microarray analysis of Cronobacter Spp. (Formerly Enterobacter sakazakii), B.D. Tall, S. Fanning, 

       C. Iversen, N. Mullane, M. H. Kothary, A. Datta, L. Carter, S. K. Curtis, B.A. McCardell, Abstract, Florence Conference on 

       Phenotype MicroArray Analysis of Microorganisms, March, 2008.

156.   Transcriptional Response of Desulfovibrio vulgaris Hildenborough to Oxygenation: An Indirect Metabolic Analysis 

       by Restriction Fragment Functional Display (RFFD), M. Santana, J. Gonzalez, Abstract, Florence Conference on 

       Phenotype MicroArray Analysis of Microorganisms, March, 2008.

155.   Influence of Pseudomonas aeruginosa on Biofilm Formation and Internalization of Burkholderia cenocepacia 

       Strains, L. Pirone, C. Auriche, C. Dalmastri, F. Ascenzioni,, A. Bevivino , Abstract, Florence Conference on Phenotype 

       MicroArray Analysis of Microorganisms, March, 2008.

154.   The Metabolic Fingerprint of Filamentous Fungi Responsible for Damage and Biodegradation in Cultural Heritage:

       Applications and Perspectives, F.P. Pinzari, V. C. Cialei, Abstract, Florence Conference on Phenotype MicroArray Analysis 

       of Microorganisms, March, 2008.

153.   Phenotypic Characterization of Thermophilic Bacilli Isolated from the Sites with Geothermal and Geo-chemical 

       Anomalies of Armenia, H. Panosyan, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms,

       March, 2008.

152.   Regulatory Network of AcrAB Multidrug Efflux Pump in Salmonella and its Role in Response to Metabolites, 

       E. Nikaido, K. Nishino, A. Yamaguchi, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, 

       March, 2008.

151.   Roles of Multidrug Efflux Pumps in Antimicrobial Peptide Resistance of Salmonella enterica, T. Nakano, K. Nishino, 

       A. Yamaguchi, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

150.   Phenotypic Analysis of Multidrug Efflux Pumps – Not Just for Multidrug Resistance, K. Nishino, Abstract, Florence 

       Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

149.   Assessment of Phenotypic Features of Bacteria Isolated from Different Antarctic Environments, S. Mangano, 

       C. Caruso, L. Michaud, A. Lo Giudice, V. Bruni, Abstract, Florence Conference on Phenotype MicroArray Analysis of 

       Microorganisms, March, 2008.

148.   Genotypic and Phenotypic Diversity of Streptococcus thermophilus Strains Isolated from the Caucasian Yogurt-like 

       Product Matsoni, I. Malkhazova, M. Merabishvili, N. Chanishvili, L. Brusetti, D. Daffonchio, D. Mora, Abstract, Florence 

       Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

147.   Differentiation of Novel Species Using the Phenotype MicroArray, C. Iversen, N. Mullane, S. Fanning, B. Mccardell, 

       B.D. Tall, M.H. Kothary, L. Carter, A. Lehner, R. Stephan, H. Joosten, Abstract, Florence Conference on Phenotype MicroArray

       Analysis of Microorganisms, March, 2008.

146.   Phenotypic Analysis of Enterobacter sakazakii (Cronobacter spp.), C. Iversen, Abstract, Florence Conference on 

       Phenotype MicroArray Analysis of Microorganisms, March, 2008.

145.   Use of a Phenotype Array to Study an Adaptive Response in Enterobacter sakazakii, B. Arku, S. Fanning, T. Quinn, 

       K. Jordan, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

144.   Phenotype MicroArray Analysis of Anaerobes, T. C. Hazen, Abstract, Florence Conference on Phenotype MicroArray 

       Analysis of Microorganisms, March, 2008.

143.   A Phenotypic Approach to Differentiate Strains within Oenococcus oeni species, S. Guerrini, S. Mangani, L. Granchi, 

       M. Vincenzini, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

142.   H-NS, A Master Controller of Warm Adaptation in Escherichia coli: A Transcriptomic Analysis, F. Fabretti, T. Carzaniga, 

       F. Falciani, G. Deho, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

141.   Novel Cues of L. pneumophila Differentiation Uncovered by Phenotype MicroArrays, R.L. Edwards, Z.D. Dalebroux, 

       M. S. Swanson, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

140.   Comparative Phenotypic Microarray Analysis of Listeria monocytogenes Strains Involved in Invasive and 

       Gastroenteritis Listeriosis Outbreaks, A. Datta, L.Carter, L. Burall, Abstract, Florence Conference on Phenotype MicroArray 

       Analysis of Microorganisms, March, 2008.

139.   Carbon and Energy Metabolism of Escherichia coli in the Intestine, T. Conway, P.S. Cohen, Abstract, Florence 

       Conferenceon Phenotype MicroArray Analysis of Microorganisms, March, 2008.

138.   Biolog Microbial Identification System-study on the Operating Regulation of Bacteria Identification, C. Chi, Y. Mei, 

       L. Jin-Xia, Y. Su, H. Hai-Rong, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, 

       March, 2008.

137.   Identification of Saccharomyces cerevisiae by the Biolog automated microbes identification system, C. Chi, L. Jin-Xia, 

        Y. Su, H. Hai-Rong, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

136.   Extended-spectrum Beta-lactamase Producing Strains of Escherichia coli Isolates: Phenotypic and Genotypic 

       Characterization, E.C. Adibe, C.E. Ilodigwe, H.I. Ekenedo, L.C. Ofora, S.I. Okonkwo, S.A. Obi, Abstract, Florence Conference 

       on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

135.   Characterization of a Porcine Cell Line by Phenotype MicroArray, M. Abuoun, J.W. Collins, M.J. Woodward, 

       R.M. La Ragione, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

134.   Integrating Biolog Phenomic Analysis with Genomic Approaches to Explore the Diversity of Natural Sinorhizobium 

       meliloti Strains, E. Biondi , Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, 

       March, 2008.

133.   Phenotypic Analysis of Cr(VI)-sensitive Mutants of Pseudomonas corrugata Strain 28, E. Tatti, Abstract, Florence 

       Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

132.   Physiological Characterization of Pseudomonas pseudoalcaligenes KF707: Biofilm Development and Adaptation to 

       Environmental Stress, S. Fedi, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, 

       March, 2008.

131.   Antimicrobials inducing E. coli Biofilm Formation, Identified by Phenotype MicroArrays, A. Boehm, Abstract, Florence 

       Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

130.   Linking Phenotype to Genotype of Epidemiologically Prevalent Salmonella by Comparative Microarray Analysis, 

       J. Guard-Bouldin, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

129.   Phenotypic Analysis of Salmonella, M. Anjum, Abstract, Florence Conference on Phenotype MicroArray Analysis of 

       Microorganisms, March, 2008.

128.   Use of PM Technology to Characterize Nutrient Utilization and Restriction in the Obligate Intracellular Bacterial 

       Pathogen Coxiella burnetii, A. Omsland, Abstract, Florence Conference on Phenotype MicroArray Analysis of 

       Microorganisms, March, 2008.

127.   Characterization of Porcine Cell Using Phenotype MicroArray, M. Abuoun, Abstract, Florence Conference on 

       Phenotype MicroArray Analysis of Microorganisms, March, 2008.

126.   PM Assay of Mammalian Cells, B. Bochner, Abstract, Florence Conference on Phenotype MicroArray Analysis of 

       Microorganisms, March, 2008.

125.   Phenotype MicroArrays as a Tool to Study Physiology of Industrially Important Fungi, I. Druzhinina, Abstract, 

       Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

124.   Pleiotropic Effects of Mutations of the LEU4 Gene in Saccharomyces cerevisiae, E. Casalone, Abstract, Florence 

       Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

123.   Unravelling Membrane Transport Mechanisms in Pseudomonas sp. through Phenomics, I. Paulsen, Abstract, 

       Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

122.   Towards Elucidation of Physiological Networks in a Cell Using PM Technology and Genetic Network Analysis, 

       H. Mori, Abstract, Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008.

121.   Use of Growth Profiling Data to Improve Constraint-based Modelling of Metabolism, L. Yang, Abstract, 

       Florence Conference on Phenotype MicroArray Analysis of Microorganisms, March, 2008

120.   Phenotype MicroArray Technology: Principles and Practice, B. Bochner, Abstract, Florence Conference on Phenotype 

       MicroArray Analysis of Microorganisms, March, 2008.

119.   Phenotypic Analysis of Food-borne Pathogens, T. Cebula, Abstract, Florence Conference on Phenotype MicroArray 

       Analysis of Microorganisms, March, 2008.

118.   Visualization of Growth Curve Data from Phenotype Microarray Experiments,, J.S. Jacobsen, D.C. Joyner, S.E. Borglin, 

       T.C. Hazen, A.P. Arkin, E.W. Bethel, 11th International Conference on Information Visualization (IV07), Zurich, Switzerland, 

       July 4-6, 2007, Published by the IEEE Computer Society.

117.   Response of Desulfovibrio vulgaris to alkaline stress, S. Stolyar, Q. He, M.P. Joachimiak, Z. He, Z.K. Yang, S.E. Borglin, 

       D.C. Joyner, K. Huang, E. Alm, T.C. Hazen, J. Zhou, J.D. Wall, A.P. Arkin, D.A. Stahl, 2007, J. Bacteriol., v.189, pp. 8944-8952.

116.   Analysis of a ferric uptake regulator (Fur) mutant of Desulfovibrio vulgaris Hildenborough, K.S. Bender, H-C Yen, 

       C.L. Hemme, Z. Yang, Z. He, Q. He, J. Zhou, K.H. Huang, E.J. Alm, T.C. Hazen, A.P. Arkin, J.D. Wall, 2007, 

       Appl. Environ. Microbiol., v.73, pp. 5389-5400.

115.   Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe (III)-NTA, 

       Y.J. Tang, R. Chakraborty, H. Garcia Martin, J. Chu, T.C. Hazen, J.D. Keasling, 2007, Appl. Environ. Microbiol., v.73, 

       pp. 3859-3864.

114.   Cell wide response to low oxygen exposure in Desulfovibrio vulgaris Hildenborough, A. Mukhopadhyay, A.M. Redding, 

       M.P. Joachimiak, A.P. Arkin, S.E. Borglin, P.S. Dehal, R. Chakraborty, J.T. Geller, T.C. Hazen, D.C. Joyner, V.J.J. Martin, 

       J.D. Wall, Z.K. Yank, J. Zhou, J.D. Keasling, J. Bacteriol., v.189, pp. 5996-6010.

113.   Pathway confirmation and flux analysis using 13C isotopic labeling of metabolites in Desulfovibrio vulgaris 

       Hildenborough via FT-ICR Mass Spectrometry, Y. Tang, F. Pingitore, A. Mukhopadhyay, R. Phan, T.C. Hazen, 

       J.D. Keasling, 2007, J. Bacteriol., v.189, pp. 940-949.

112.   Study of Nitrate Stress in Desulfovibrio vulgaris Hildenborough Using iTRAQ Proteomics, A.M. Redding, 

       A. Mukhopadhyay, D. Joyner, T.C. Hazen, J.D. Keasling, 2006, Briefings in Functional Genomics and Proteomics, 

       v.5, pp. 133-143.

111.   Energetic consequences of nitrite stress in Desulfovibrio vulgaris Hildenborough inferred from global analysis, 

       Q. He, K.H. Huang, Z. He, E.J. Alm, M.W. Fields, T.C. Hazen, A.P. Arkin, J.D. Wall, J. Zhou, 2006, Appl. Environ. Microbiol, 

       v.72, pp. 4370-4381.

110.   Salt stress in Desulfovibrio vulgaris Hildenborough: An integrated genomics approach, A. Mukhopadhyay,

       Z. He, E.J. Alm, A.P. Arkin, E.E. Baidoo, S.C. Borglin, W. Chen, T.C. Hazen, Q. He, H.-Y. Holman, K. Huang, R. Huang,

       D.C. Joyner, N. Katz, M. Keller, P. Oeller, A. Redding, J. Sun, Z. Yang, J.D. Wall, J. Wei, H.-C. Yen, J. Zhou, J.D. Keasling,

       J. Bacteriol, v.188, pp. 4068-4078.

109.   The global ppGpp-mediated stringent response to amino acid starvation in Escherichia coli, M.F. Traxler, 

       S.M. Summers, H-T Nguyen, V. M. Zacharia, G.A. Hightower, J.T. Smith, T. Conway, Molecular Microbiology, 

       v.68, pp. 1128-1148.

108.   Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa, M.A. Oberhardt, 

       J. Puchalka, K.E. Fryer, V.A. Martins dos Santos, J.A. Papin, Bacteriol., v.190, pp. 2790-2803.

107.   Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine, 

       A.J. Fabich, S.A. Jones, F.Z. Chowdhury, et al., Infect. Immun., v.76, pp. 1143-1152.

106.   Diversity and productivity peak at intermediate dispersal rate in evolving metacommunities, P.A. Venail, 

       R.C. MacLean, T. Bouvier, M.A. Brockhurst, M.E. Hochberg, N. Mouquet, Nature, v.452, pp. 210-214.

105.   Photostimulation of Hypocrea atroviridis growth occurs due to a cross-talk of carbon metabolism, blue light 

       receptors and response to oxidative stress, M.A. Friedl, M. Schmoll, C.P. Kubicek, I.S. Druzhinina, Microbiology, 2008, 

       v.154, pp. 1229-1241.

104.   Carbon source dependence and photostimulation of conidiation in Hypocrea atroviridis, M.A. Friedl, C.P. Kubicek, 

       I.S. Druzhinina, Appl. Environ. Microbial., 2008, v.74, pp. 245-250.

103.   A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and 

       thermodynamic information., A.M. Feist, C.S. Henry, J.L. Reed, M. Krummenacker, A.R. Joyce, P.D. Karp, L.J. Broadbelt, 

       V. Hatzimanikatis, B.O. Palsson, Mol. Syst. Biol., 2007, v.3, p. 121.

102.   Beta-D-Allose inhibits fruiting body formation and sporulation in Myxococcus xanthus, M. Chavira, N. Cao, 

       K. Le, T. Riar, N. Moradshahi, M. McBride, R. Lux, W. Shi, J. Bacteriol., 2007, v.189, pp. 169-178.

101.   Application of DNA bar codes for screening of industrially important fungi: the haplotype of Trichoderma 

       harzianum sensu stricto indicates superior chitinase formation., V. Nagy, V. Seidl, G. Szakacs, M. Komon-Zelazowska, 

       C.P. Kubicek, I.S. Druzhinina, Appl. Environ. Microbiol., 2007, v.73, pp. 7048-7058.

100.   Exploring Genotypic and Phenotypic Diversity of Microbes Using Microarray Approaches, A. Mukherjee, S.A. Jackson,

       J.E. LeClerc, T.A. Cebula, Toxicology Mechanisms and Methods, 2006, v.16, pp. 121-128.

99.   Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina, I.S. Druzhinina,

      M. Schmoll, B. Seiboth, C.P. Kubicek, Appl. Environ. Microbiol., 2006, v.72, pp. 2126-2133.

98.   Carbon source utilization by the marine Dendryphiella species D. arenaria and D. salina, T.E. dela Cruz, B.E. Schulz, 

      C.P. Kubicek, I.S. Druzhinina, FEMS Microbial Ecol., 2006, v.58, pp. 343-353.

97.   H-NS controls metabolism and stress tolerance in Escherichia coli O157:H7 that influence mouse passage, I. Erol, 

      K-C Jeong, D.J. Baumler, B. Vykhodets, S-H Choi, C.W. Kaspar , BMC Microbiology, 2006, v.6.

96.   A Screening system for carbon sources enhancing beta-N-acetylglucosaminidase formation in Hypocrea atroviridis

      (Trichoderma atroviride), V. Seidl, IS Druzhinina, C.P. Kubiceka, Microbiology, 2006, v.152, pp. 2003-2012.

95.   Altered Utilization of N-Acetyl-D-Galactosamine by Escherichia coli O157:H7 from the 2006 Spinach Outbreak, 

      A. Mukherjee, M. K. Mammel, J. E. LeClerc, T. A. Cebula, Journal of Bacteriology, 2008, v.190, pp. 1710-1717.

94.   Uncovering New Metabolic Capabilities of Bacillus subtilis Using Phenotype Profiling of Rifampin-Resistant rpoB 

      Mutants, A. E. Perkins, W. L. Nicholson, Journal of Bacteriology, 2008, v.190, pp. 807-814.

93.   Carbon Source Dependence and Photostimulation of Conidiation in Hypocrea atroviridis, M. A. Friedl, C. P. Kubicek,

      I. S. Druzhinina, Applied and Environmental Microbiology, 2008, v.74, pp. 245-250.

92.   Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1, M. A. 

      Oberhardt, J. Puchalka, K. E. Fryer, V. A. P. Martins dos Santos, J. A. Papin, Journal of Bacteriology, v.190, pp. 2790-2803.

91.   Dual Involvement of CbrAB and NtrBC in the Regulation of Histidine Utlization in Pseudomonas fluorescens SBW25, 

      X.-X. Zhang, P. B. Rainey, Genetics, 2008, v.190, pp. 185-195.

90.   A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and 

      thermodynamic information, A. M. Feist, C. S. Henry, J. L. Reed, M. Krummenacker, A. R. Joyce, P. D. Karp, 

      L. J. Broadbelt, V. Hatzimanikatis, B. Paisson, Molecular Systems Biology 3, 2007.

89.   Regulatory Overlap and Functional Redundancy among Bacillus subtilis Extracytoplasmic Function s Factors, 

      T. Mascher, A.-B. Hachmann, J. D. Helmann, Journal of Bacteriology, 2007, v.189, pp. 7500-7511.

88.   Pseudomonas syringae pv. tomato DC3000 Uses Constitutive and Apoplast-Induced Nutrient Assimilation Pathways 

      to Catabolize Nutrients That Are Abundant in the Tomato Apoplast, A. Rico, G. M. Preston, MPMI, 2008, v.21, pp. 269-282.

87.   Genome-scale Reconstruction of Metabolic Network in Bacillus subtilis Based on High-throughput Phenotyping and 

      Gene Essentiality Data, Y. K. Oh, B. O. Palsson, S. M. Park, C. H. Schilling, R. Mahadevan, J. Biol. Chem., v.282, 

      pp. 28791-28799.

86.   Genomic and Phenotypic Diversity of Coastal Vibrio cholerae Strains Is Linked to Environmental Factors, D. P. Keymer,

      M. C. Miller, G. K. Schoolnik, A. B. Boehm, Applied and Environmental Microbiology, 2007, v.73, pp. 3705-3714.

85.   Metabolic capacity of Bacillus cereus strains ATCC 14579 and ATCC 10987 interlinked with comparative genomics, 

      M. Mols, M. de Been, M. H. Zwietering, R. Moezelaar, T. Abee, Environmental Microbiology, 2007, pp. 2933-2944.

84.   Integrated bioinformatic and phenotypic analysis of RpoN-dependent traits in the plant growth-promoting bacterium 

      Pseudomonas fluorescens SBW25, J. Jones, D.J. Studholme, C.G. Knight, G.M. Preston, Environmental Microbiology, 2007, 

      pp. 3046-3064.

83.   Genetic Analysis of a Novel Pathway for D-Xylose Metabolism in Caulobacter crescentus, C. Stephens, B. Christen, 

      T. Fuchs, V. Sundaram, K. Watanabe, U. Jenal, Journal of Bacteriology, 2007, v.189, pp. 2181-2185.

82.   Visualization of Growth Curve Data from Phenotype Microarray Experiments, J. S. Jacobsen, D. C. Joyner, S. E. Borglin, 

      T. C. Hazen, A. P. Arkin, E. W. Bethel, 11th International Conference Information Visualization (IV 07), 2007.

81.   Contribution of Target Gene Mutations and Efflux to Decreased Susceptibility of Salmonella enterica Serovar 

     Typhimurium to Fluoroquinolones and Other Antimicrobials, S. Chen, S. Cui, P. F. McDermott, S. Zhao, D. G. White,

     I. Paulsen, J. Meng, Antimicrobial Agents and Chemotherapy, 2007, v.51,pp. 535-542. 

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