Phenotype MicroArrays™ for Microbial Cells 사용 문헌 리스트 (1-80) 

80.   Cryptococcus neoformans a Strains Preferentially Disseminate to the Central Nervous System during Coinfection, 

      K. Nielsen, G. M. Cox, A. P. Litvintseva, E. Mylonakis, S. Malliaris, D. K. Benjamin, Jr., S. S. Giles, T. G. Mitchell, 

      A. Casadevall, J. R. Perfect, J. Heitman, Infection and Immunity, 2005, v.73, pp. 4922-4933.

79.   Regulation of Carbon and Nitrogen Utilization by CbrAB and NtrBC Two-Component Systems in Pseudomonas 

      aeruginosa, W. Li, C-D. Lu, Journal of Bacteriology, 2007, v.189, pp. 5413-5420.

78.   Diversity of soil mycobacterium isolates from three sites that degrade polycyclic aromatic hydrocarbons, 

      C.D. Miller, R. Child, J.E. Hughes, M. Benscai, P.P. Der, R.C. Sims, A.J. Anderson, Journal for Applied Microbiology, 

      v.102, pp. 1612-1624.

77.   Characterization of Chromate-Resistant and Reducing Bacteria by Traditional Means and by a High-Throughput 

      Phenomic Technique for Bioremediation Purposes, C. Viti, F. Decorosi, E. Tatti, L. Giovannetti, Biotechnol Prog., 

      2007, v.23, pp. 553-559.

76.   Growth Characteristics of Microorganisms on Commercially Available Animal-free Alternatives to Tryptic Soy 

      Medium, D. Cleland, K. Jastrzembski, E. Stamenova, J. Benson, C. Catranis, D. Emerson, B. Beck, Journal of Microbiological 

      Methods, 2007, v.69, pp.345-352.

75.   Escherichia coli enzyme IIANtr Regulates the K+ Transporter TrkA, C-R. Lee, S-H. Cho, M-J. Yoon,A. Peterkofsky, 

      Y-J. Seok, 2007, The National Academy of Sciences of the USA, 2007.

74.   A Previously Undescribed Pathway for Pyrimidine Catabolism, K.D. Loh, P. Gyaneshwar, E.M. Papadimitriou, 

      R. Fong, K-S. Kim, R. Parales, Z. Zhou, W. Inwood, and S. Kustu, Proceedings of the National Academy of Sciences, 

      2006, v.103, pp. 5114-5119.

73.   FhuA and HgbA, Outer Membrane Proteins of Actinobacillus pleuropneumoniae: Their Role as Virulence 

      Determinants, L. Shakarji, L.G. Mikael, R. Srikumar, M. Kobisch, J.W. Coulton, and M. Jacques, Canadian Journal of 

      Microbiology, 2006, v.52, pp. 391-396.

72.   Phenotype MicroArray Analysis of Yeast Strains, B. Bochner, Abstract from the International Wine Microbiology 

      Symposium, 2006.

71.   Phenotype MicroArrays that Assay the Energy Producing Pathways Active in Cells, B. Bochner, Abstract from 

      the IBC Conference on Metabolic Syndrome, 2006.

70.   Global Carbon Utilization Profiles of Wild-Type, Mutant, and Transformant Strains of Hypocrea jecorina, I.S. Druzhinina, 

      M. Schmoll, B. Seiboth, and C.P. Kubicek, Applied and Environmental Microbiology, 2006, v.72, pp. 2126-2133.

69.   Yeast as a Drug Discovery Platform in Huntington’s and Parkinson’s Diseases, T.F. Outeiro and F. Giorgini, 

      Biotechnology Journal, 2006, v.1, pp. 1-12.

68.   Cell Scenario a New Look at Microarrays, C. Potera, Environmental Health Perspectives, 2006, v.114, pp. A-172-A175.

67.   Biolog Advances Global Cell Analysis Scans, C. Potera, Genetic Engineering News, 2006, v.26, pp. 24-25.

66.   Development of Phenotype MicroArrays for Measuring Energy Producing Pathways in Mammalian Cells, L.A. Wiater, 

      M. Siri, R. Huang, and B.R. Bochner, Poster presented at Cambridge Healthtech Institute’s 13th International Molecular 

      Medicine Tri-Conference, February 2006 and The Federation of American Societies for Experimental Biology, April 2006.

65.   Correlation of Phenotype with the Genotype of Egg-Contaminating Salmonella enterica Serovar Enteritidis, C.A. 

      Morales, S. Porwollik, J.G. Frye, H. Kinde, and M. McClelland, Applied and Environmental Microbiology, 

      2005, v.71, pp. 4388-4399.

64.   A selC-Associated Genomic Island of the Extraintestinal Avian Pathogenic Escherichia coli Strain BEN2908 is Involved 

      in Carbohydrate Uptake and Virulence, I. Chouikha, P. Germon, A. Bree, P. Gilot, M. Moulin-Schouleur, and C. Schouler, 

      Journal of Bacteriology, 2006, v.188, pp. 977-987.

63.   Phenotype Microarray Profiling of Staphylococcus aureus menD and hemB Mutants with the Small-Colony-Variant 

      Phenotype, C. von Eiff, P. McNamara, K. Becker, D. Bates, X-H. Lei, M. Ziman, B.R. Bochner, G. Peters, and R.A. Proctor, 

      Journal of Bacteriology, 2006, v.188, pp. 687-693.

62.   Discovering New Drugs on the Cellular Level, NASA Spinoff, 2005, pp. 12-13.

61.   Global Physiological Analysis of Carbon- and Energy- Limited Growing Escherichia coli Confirms a High Degree of 

      Catabolic Flexibility and Preparedness for Mixed Substrate Utilization, J. Ihssen, and T. Egli, Environmental Microbiology, 

      2005, v.7, pp. 1568-1581.

60.   Role of HtrA in Surface Protein Expression and Biofilm Formation by Streptococcus mutants, S. Biswas and I. Biswas, 

      Infection and Immunity, 2005, v.73, pp. 6923-6934.

59.   Requirements of the Dephospho-form of Enzyme IIANTR for Derepression of Escherichia coli K-12 ilvBN Expression, 

      C-R. Lee, B-M. Koo, S-H. Cho, Y-J. Kim, M-J. Yoon, A. Peterkofsky, and Y-J. Seok, Molecular Microbiology, 

      2005, v.58, pp. 334-344.

58.   Harnessing Natural Diversity to Probe Metabolic Pathways, O.R. Homann, H. Cai, J.M. Becker, and S.L. Lindquist, 

      PLOS Genetics, 2005, v. 1, pp. 0715-0729.

57.   The Phagosomal Transporter A Couples Threonine Acquisition to Differentiation and Replication of Legionella 

      pneumophila in Macrophages, J-D. Sauer, M.A. Bachman, and M.S. Swanson, Proceedings of the National Academy of 

      Sciences, 2005, v.102, pp. 9924-9929.

56.   A New Pathway for Pyrimidine Catabolism in E. coli K-12: The b1012-b1006 Operon, K.D. Loh, P. Gyaneshwar, 

      E.M. Papadimitriou, R. Fong, K-S. Kim, Z. Zhou, W. Inwood, and S. Kutsu, Abstract from the International Union of 

      Microbiological Societies, July 2005.

55.   Metabolic Analysis of Helicobacter pylori Strain 26695 with Phenotype MicroArray Technology, X-H. Lei, S. Tan, 

      D. E. Berg, and B. R. Bochner, Poster B-760, Session #5-B, presented at International Union of Microbiological Societies, 

      July 2005.

54.   Characterization of the Genetic Origins of Phenotypic Diversification of the Pathogenic Salmonellae, B. Bochner, 

      C.A. Morales, S. Porwollik, J.G. Frye, R. Gast, X-H. Lei, M. Ziman, M. McClelland, and J. Guard-Bouldin, Poster B-800, 

      Session # 6-B, presented at International Union of Microbiological Societies, July 2005.

53.   Phenotype MicroArray Profiling of Staphylococcus aureus menD and hemB Mutants with Small Colony Variant 

      (SCV) Phenotype, C. von Eiff, P. McNamara, K. Becker, D. Bates, X-H. Lei, M. Ziman, B.R. Bochner, G. Peters, and 

      R.A. Proctor, Poster B-873, Session # 138-B, presented at International Union of Microbiological Societies, July 2005.

52.   Use of Phenotype MicroArray Technology to Fingerprint E. coli Loss-of-Function Mutants, M. Ziman, D. Chan, 

      J. Carlson, S. Suharnan, H. Mori, H. Gobara, K. Nakahigashi, T. Baba, S. Tamishima, H. Matsui, and M. Arita, Poster 

      presented at the 7th Annual Frontier of Microbial Research Genome Workshop, March 2005.

51.   Proline-Based Modulation of 2,4-Diacetylphloroglucinol and Viable Cell Yields in Cultures of Pseudomonas 

      fluorescens Wild-Type and Over-Producing Strains, P.J. Slininger and M.A. Shea-Andersh, Applied Microbiology 

      and Biotechnology, 2005, v.68, pp. 630-638.

50.   Gene Array Analysis of Yersinia enterocolitica FlhD and FlhC: Regulation of Enzymes Affecting Synthesis and   

      Degradation of Carbamoylphosphate, V. Kapatral, J.W. Campbell, S.A. Minnich, N.R. Thomson, P. Matsumura, and 

      B.M. Pruess, Microbiology, 2004, v.150, pp. 2289-2300.

49.   Phenotypic MicroArray Provides a Biochemical Profile of Staphylococcus aureus menD and hemB Mutants with 

      Small Colony Variant (SCV) Phenotype, C. von Eiff, P. McNamara, D. Bates, K. Becker, B. Bochner, G. Peters, R.A. Proctor, 

      Poster presented at 11th International Symposium on Staphylococci & Staphylococcal Infections, October 2004.

48.   Phenotype MicroArray Analysis of a S. aureus mnhD (NuoN-like) Mutant, a Thrombin-Induced Platelet 

      Microbicidal Protein (tPMP)-Resistant Strain, R.A. Proctor, P.J. McNamara, A. Franco-Buff, B.R. Bochner, J. Schrenzel, 

      M. Yeaman, and A. Bayer, Poster presented at 11th International Symposium on Staphylococci & Staphylococcal Infections, 

      October 2004.

47.   Identifying Antimicrobials Using Isobologram Arrays, L.A. Wiater, K. Kim, J.D. Carlson, and P. Gadzinski, Abstract from 

      the 104th General Meeting of the American Society of Microbiology, May 2004.

46.   Phenotype MicroArray Analysis of Two-Component Regulatory Genes of Escherichia coli, X-H. Lei, L. Zhou, B.L. Wanner, 

      and B. R. Bochner, Poster K-144, presented at 103rd General Meeting of the American Society of Microbiology, May 2003.

45.  Genomic and Physiological Characterization of Desulfovibrio vulgaris Strains Isolated from A Metal Contaminated Lake, 

      S.M. Stolyar, C.B. Walker, H-C. Yen, B. Zuniga, N. Pinel, H. Gough, Z. He, Q. He, J. Zhou, T.C. Hazen, S.E. Borglin, J.D. Wall, 

      and D.A. Stahl, Abstract from the ASM 105th Annual Meeting, June 5th-June 9th 2005.

44.   Phenotype MicroArray Analysis of Desulfovibrio vulgaris, S.E. Borglin, T.C. Hazen, J. Carlson, J. Wall, and D. Joyner, 

      Abstract from the ASM 105th Annual Meeting, June 5th-June 9th 2005.

43.   High Throughput Analysis of Stress Growth Response in Shewanella oneidensis MR1, . Katz, T.C. Hazen, R. Huang, 

      D. Joyner, and S.E. Borglin, Abstract from the ASM 105th Annual Meeting, June 5th-June 9th 2005.

42.   Linkage of 23S and rrlA Single Nucleotide Polymorphisms to Phenotype Heterogeneity of Salmonella Enteritidis, 

      C.A. Morales and J. Guard-Bouldin, Abstract from the ASM 105th Annual Meeting, June 5th-June 9th 2005.

41.   Legionella pneumophilaRequire phtA for Threonine Acquisition, Differentiation and Replication in Murine Bone 

      Marrow Derived Macrophages, J-D. Sauer and M. Swanson, Abstract from the ASM 105th Annual Meeting, 

      June 5th-June 9th 2005.

40.   Phenotype MicroArray analysis of an Escherichia coli O157: H7 luxS Mutant, M. Walters, Abstract from the ASM 105th 

      Annual Meeting, June 5th-June 9th 2005.

39.   Correlation of Phenotype with the Genotype of egg-contaminating Salmonella Enteritidis, C.A. Morales, S. Porwllik, 

      J.G. Frye, H. Kinde, M. McClelland, and J. Guard-Bouldin, Abstract from the ASM 105th Annual Meeting.

38.   Only Rarely Does Inorganic Polyphosphate (poly P) Depletion Decrease Motility in Helicobacter pylori, S. Tan, C.D. 

      Fraley, W.L. Beatty, Q. Gong, B.K. Dieckgraefe, A. Kornberg, and D.E. Berg, Abstract from the ASM 105th Annual Meeting, 

      June 5th-June 9th 2005.

37.   Correlation of Phenotype with the Genotype of Egg-contaminating Salmonella Enteritidis, C.A. Morales, S. Porwllik, 

      J.G. Frye, H. Kinde, M. McClelland, and J. Guard-Bouldin, Abstract from the ASM Conference on Integrating Metabolism and 

      Genomics, April 30th-May 3rd 2004.

36.   Metabolic Differences in Yersinia pestis as a Function of Temperature and Calcium Detected by Phenotype Arrays, 

      A.E. Holtz, I.K. Fodor, J.P. Fitch, and S.L. McCutchen-Maloney, Abstract from the 44th Annual Meeting of the American

      Society for Cell Biology, December 2004.

35.   A Plague on Many Houses, The American Society for Cell Biology Press Book 2004, p 6.

34.   LLNLs Ann Holtz-Morris on Studying Y. pestis with Cellular Arrays, Inside BioAssays, Dec. 2004.

33.   Probing Microbial Phenotypes in Wake of Genomics Data Flood, J.F. Fox, ASM News, 2000, v.66, pp. 391-392.

32.   Characterization of the Escherichia coli AaeAB Efflux Pump: A Metabolic Relief Valve?, T.K. Van Dyk, L.J. Templeton, 

      K.A. Cantera, P.L. Sharpe, and F.S. Sariaslani, Journal of Bacteriology, 2004, v. 186, pp. 7196-7204.

31.   Metabolomic Analysis of Escherichia coli K-12 Mutants with Deletions of 1440 Genes, M. Ito, T. Baba, H. Mori, and 

      H. Mori, Abstract from the ASM Integrating Metabolism and Genomics Conference April 30 – May 3, 2004.

30.   A Novel Fermentation/Respiration Switch Protein Regulated by Enzyme IIAGlc in Escherichia coli, B.M. Koo, 

      M.J. Yoon, C.R. Lee, T.W. Nam, Y.J. Choe, H. Jaffe, A. Peterkofsky, and Y.J Seok, The Journal of Biological Chemistry, 

      2004, v.279, pp. 31613-31621.

29.   Gene and Bacterial Identification Using High-Throughput Technologies: Genomics, Proteomics, and Phenomics, 

      S.F. Al-Khaldi and M.M. Mossoba, Nutrition, 2004, v.20, pp. 32-38.

28.   Integrating High-Throughput and Computational Data Elucidates Bacterial Networks, M.W. Covert, E.M. Knight, 

      J.L. Reed, M.J. Herrgard, and B.O. Palsson, Nature, 2004, v.429, pp. 92-96.

27.   Global Analysis of Predicted Proteomes: Functional Adaptation of Physical Properties, C.G. Knight, R. Kassen, 

      H. Hebestreit, and P.B. Rainey, Proceedings of the National Academy of Sciences, 2004, v.101, pp. 8390-8395 .

26.   ASAP, a Systematic Annotation Package for Community Analysis of Genomes, J.D. Glasner, P. Liss, G. Plunkett III, 

      A. Darling, T. Prasad, M. Rusch, A. Brynes, M. Gilson, B. Biehl, F.R. Blattner, and N.T. Perna, Nucleic Acids Research, 

      2003, v.31, pp. 147-151.

25.   Global Nutritional Profiling for Mutant and Chemical Mode-of-Action Analysis in Filamentous Fungi, M.M. Tanzer, 

      H.N. Arst, A.R. Skalchunes, M. Coffin, B.A. Darveaux, R.W. Heiniger, and J.R. Shuster, Functional Integrated Genomics, 

      2003, v.3, pp. 160-170.

24.   Fast Tracking Bioprocessing Development and Optimisation, C. Gorman, Drug Plus International, 2003, v.2 pp. 6-9.

23.   Phenotype MicroArray Analysis of Escherichia coli K-12 Mutants with Deletions of All Two-Component Systems, 

      L.Zhou, X.-H. Lei, B.R. Bochner, and B.L. Wanner, Journal of Bacteriology, 2003, v.185, pp. 4956-4972.

22.   Experimental Adaptive Radiation in Pseudomonas, R.C. MacLean and G. Bell, The American Naturalist, 2002, 

      v.160 pp. 569-581.

21.   Divergent Evolution During an Experimental Adaptive Radiation, R.C. MacLean and G. Bell, Proc. Biol. Sci., 

      2003, v.270 pp. 1645-1650.

20.   New Technologies to Assess Genotype-Phenotype Relationships, B.R. Bochner, Nature Reviews Genetics, 

      2003, v.4 pp. 309-314.

19.   Phenotype MicroArrays: Their Use in Antibiotic Discovery, B.R. Bochner, Chapter 9 in Microbial Genomics and 

      Drug Discovery, edited by T.J. Dougherty and S.J. Projan, Marcel Dekker, Inc., 2003.

18.   Phenotype MicroArrays for High-Throughput Phenotypic Testing and Assay of Gene Function, B.R. Bochner, 

      P. Gadzinski, and E. Panomitros, Genome Research, 2001, v.11, pp. 1246-1255.

17.   Identification of Bacteria and Bacterial Genes: Infrared Spectroscopy, Genomics, Proteomics and Phenomics, 

      S. Al-Khaldi and M. Mossoba, Microbiological Method Forum News, 2003, v.23, pp.1-6.

16.   FlhD/FlhC is a Regulator of Anaerobic Respiration and the Entner-Doudoroff Pathway through Induction of 

      the Methyl-Accepting Chemotaxis Protein Aer, B.M. Prub, J.W. Campbell, T.K. Van Dyk, C. Zhu, Y. Kogan, and 

      P. Matsumura, Journal of Bacteriology, 2003, v.185, pp. 534-543.

15.   Next-Generation Microarray Technologies, B.J. Sedlack, Genetic Engineering News, 2003, v.23, p.20.

14.   Engineering a Reduced Escherichia coli Genome, V. Kolisnychenko, G. Plunkett, III, C.D. Herring, T. Feher, J. Posfai, 

      F.R. Blattner, and G. Posfai, Genome Research, 2002, v.12, pp. 640-647.

13.   Carbon and Nitrogen Substrate Utilization by Archival Salmonella typhimurium LT2 Cells, B.S. Tracy, K.K. Edwards, 

      and A. Eisenstark, BMC Evolutionary Biology, 2002, v.2, pp. 1-6.

12.   Regulation of Carbon Utilization by Sulfur Availability in Escherichia coli and Salmonella typhimurium, J.A. Quan, 

      B.L. Schneider, I.T. Paulsen, M. Yamada, N.M. Kredich, and M.H. Saier, Jr., Microbiology, 2002, v.148, pp. 123-131.

11.   Gene Discovery and Gene Function Assignment in Filamentous Fungi, L. Hamer, K. Adachi, 

      M.V. Montenegro-Chamorro, M.M. Tanzer, S.K. Mahanty, C. Lo, R.W. Tarpey, A.R. Skalchunes, R.W. Heiniger, S.A. Frank, 

      B.A. Darveaux, D.J. Lampe, T.M. Slater, L. Ramamurthy, T.M. DeZwaan, G.H. Nelson, J.R. Shuster, J. Woessner, and 

      J.E. Hamer, Proc. Natl. Acad. Sci. USA, 2001, v.9, pp. 5110-5115.

10.   Discovery Technologies, Intermediate Steps Follow Up On Genome Project, N. Flanagan, Genetic Engineering News, 

      2001, v.21, p.1.

9.   Proteome Chips Promise to Speed Decoding of the Human Genome, M. Downs, Small Times, 2001.

8.   Phenotyping Goes High Throughput with Biolog Phenotype MicroArrays, J. Lane, The Scientist, 2001, v.15.

7.   High-Throughput Cell Analytic Tool, B.R. Bochner, Drug Discovery/Technology News, 2001, v.4.

6.   Phenotype Arrays, A. Marshall, Nature Biotechnology, 2001, v.19, pp. 629.

5.   Cellular Assays to Drug Discovery, T. Mullane, Pharmaceutical Laboratory, June 2000.

4.   The Population Genetics of Ecological Specialization in Evolving Escherichia coli Populations, V. S. Cooper and 

     R. E. Lenski, Nature, 2000, v.407, pp. 736-739.

3.   Megaplasmid pRme2011a of Sinorhizobium meliloti is Not Required for Viability, I. J. Oresnik, S. Liu, C. K. Yost, 

    and M. F. Hynes, Journal of Bacteriology, 2000, v.182, pp. 3582-3586.

2.   The Consequences of Growth of a Mutator Strain of Escherichia coli as Measured by Loss of Function Among 

    Multiple Gene Targets and Loss of Fitness, P. Funchain, A. Yeung, J. L. Stewart, R. Lin, M. M. Slupska, and J. H. Miller, 

    Genetics Society of America, 2000, v.154, pp. 959-970.

1.   Diagnostic Advances: Genotypic, Phenotypic, Fast, J.F. Fox, ASM News, 2000, v.66, pp. 391-392.

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